PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023912302.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 151aa MW: 16586.7 Da PI: 4.7117

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023912302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.5	0.00013	8	43	13	54
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R+ +N+++++Lr ++ l+Ka+i A +YI++L XP_023912302.1 8 RAALNEKLQQLRAATNSN------ALNKASIIVDASRYINEL 43 677899999999877773......5**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MGSREHKRAA LNEKLQQLRA ATNSNALNKA SIIVDASRYI NELKQKVERL NQDIGTSQSS 60 KAQNSLPAVT VETLERGFLI NVFSEKNCPG LLVSILEAFE ELGLEVLDAR VSCSDIFQLQ 120 AVGGENRDSL DAQVVKQAVL EAIKSCNEEQ E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	3e-10	bHLH family protein