PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912622.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 183aa    MW: 20551.2 Da    PI: 6.634
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.9e-11963255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    r+  + +Er+RR++++  +++L +l+P+  s++ ++  s  + L +A +YIk Lq
  XP_023912622.1  9 RTDRKTIERNRRNQMKALYSQLHSLVPHqTSRGLQEVTSLPDQLDEAANYIKRLQ 63
                    778899**********************555666666*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MENNPSSSRT DRKTIERNRR NQMKALYSQL HSLVPHQTSR GLQEVTSLPD QLDEAANYIK  60
RLQTKLERMK EKKNNLMGIH EKSNASTDCG MTMGFKPPQI EIHEVGSALE VVLITGLDFQ  120
FMFNETIRVL HEEGAEIVNA SFTVVEDTVF HTIHSKVGDS ALGYGAAGIY ERLNKFVSDA  180
NGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-48bHLH family protein