PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912623.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 180aa    MW: 20252.9 Da    PI: 6.634
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912623.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.34.9e-12960255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                    r+  + +Er+RR++++  +++L +l+P++   +s+   s  + L +A +YIk Lq
  XP_023912623.1  9 RTDRKTIERNRRNQMKALYSQLHSLVPHQ---TSREvTSLPDQLDEAANYIKRLQ 60
                    778899**********************9...88888*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MENNPSSSRT DRKTIERNRR NQMKALYSQL HSLVPHQTSR EVTSLPDQLD EAANYIKRLQ  60
TKLERMKEKK NNLMGIHEKS NASTDCGMTM GFKPPQIEIH EVGSALEVVL ITGLDFQFMF  120
NETIRVLHEE GAEIVNASFT VVEDTVFHTI HSKVGDSALG YGAAGIYERL NKFVSDANGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-50bHLH family protein