PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912826.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 231aa    MW: 26177.7 Da    PI: 7.4376
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912826.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.83e-16129212190
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+k +++s+v+   +l lp  f++eh  +  ++ ++tl de+  ++  k+  +k++    l++GW++F+ +++L +gD +vF+l++ ++f
  XP_023912826.1 129 FLKPMLQSHVSGGFWLGLPVYFCKEHLPN--KDEMITLVDEDEDEFPTKYLAEKNG----LSGGWRGFAIDHELVDGDALVFQLINPTTF 212
                     89************************644..4569***************666666....***********************9975555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MVESKRSYEE CRKQRLEENK KRMEELNIGK LALALKASST PKSSPAKQVK RPRVSLDVSS  60
VPVRRSSRTA NKPPPNYKEV PIEPLGSLRR SYRRGSLLSR FYASDGARQD AIERAEQLES  120
DLGSDFPTFL KPMLQSHVSG GFWLGLPVYF CKEHLPNKDE MITLVDEDED EFPTKYLAEK  180
NGLSGGWRGF AIDHELVDGD ALVFQLINPT TFKVSRWTQI DALLDNSDVE C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-65B3 family protein