PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912861.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 246aa    MW: 28074.4 Da    PI: 8.932
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912861.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.3e-1886175198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k ++ps+v++  +l lp++f+++++     +  +tl de+gr++ev +     +++  l++GW++F  a++L+e+D++vF+l+    f+l+v 
  XP_023912861.1  86 FVKFMLPSHVTRGFWLGLPRDFCKDYMPC--HDSIITLVDERGREFEVIY--LEARKG--LSGGWRSFSIAHRLCERDVLVFQLVL--PFKLKVY 172
                     89************************633..3448***************..666655..9**********************875..8999999 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_023912861.1 173 IVR 175
                     987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MKAVQLDESV HKHEKLEEGY ANMEDQQAFA WFSKPMVGSK KPRTSISNKP KKAIIDHLYK  60
RDDVKSSAME LAEEVQAYLA ADTPSFVKFM LPSHVTRGFW LGLPRDFCKD YMPCHDSIIT  120
LVDERGREFE VIYLEARKGL SGGWRSFSIA HRLCERDVLV FQLVLPFKLK VYIVREICLT  180
EVDGAVGLMK LARVRGPNFV TAAEKHSKPS PIEKNSRKVL DDTNARMCLE KSSVKNSGSW  240
EESRFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.13e-40B3 family protein