PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912927.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 247aa    MW: 27514.9 Da    PI: 5.832
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.21.3e-1563112255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr++    +Wv+e+r+p   +k+ r++lg+f t+++Aa+a++ a+++l+g
  XP_023912927.1  63 IYRGVRQRN-GTKWVSEVREP---NKKSRIWLGTFPTPDMAARAHDVAALALRG 112
                     69****998.899****9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDFESESLSS SSSSSSSQLS PYSPCNPSYC SSSSSSSSSS QASLKSHKRK SGRKKFKETR  60
HPIYRGVRQR NGTKWVSEVR EPNKKSRIWL GTFPTPDMAA RAHDVAALAL RGTLAELNFP  120
DSAWLVPRPN SSSAKDIQMA AQKAAEAFRP SDNKKEEKVL EPCLVDMQFM ESKKEVIEPK  180
ITLEILCESK DNPEQPGTFF LDEEALFNMP GLLESMAEGL ILTPPARQRG FDWDDLGCDL  240
DLTLWTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.12e-49ERF family protein