PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912944.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 234aa    MW: 26285.6 Da    PI: 10.1797
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.6e-08174229147
                      TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 
                      r+ WT+eE+  l+++v+ +         W++I +       k Rt+ ++k++w++ 
   XP_023912944.1 174 RLLWTAEEENMLKEGVHHFSASakknvPWRKILELGRhifhKSRTPADLKDKWRTM 229
                      677*****************99***********9999****************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MTEDGALDAS KGSQGGLKTH EENISEAHQS KFAEVVENIQ VEMTEDGALD SSKGGSMDGL  60
KVSEENKSRS KDEEQMQPKS PKQTSNADFA SGTMDSDMEI LAARVCRIKQ RAQKKAFPQN  120
DDSPMKLSSQ ENNTTEKKVT SKNKKHAASK KSRQPQVSTK QFTTMPFPTA KRKRLLWTAE  180
EENMLKEGVH HFSASAKKNV PWRKILELGR HIFHKSRTPA DLKDKWRTML AKEP