PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913261.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 253aa MW: 29308.7 Da PI: 8.7863

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.6e-16	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++++++G g W++++ g++R++k+c++rw++yl XP_023913261.1 9 KGAWTGEEDIRLKQCIEKYGEGKWHLVPVSAGLNRCRKSCRLRWLNYL 56 79********************************************97 PP
2	Myb_DNA-binding	44.8	2.9e-14	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E +l ++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_023913261.1 68 RGNFVADEVDLMLRLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNTHL 113 799999**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MYGSFGVRKG AWTGEEDIRL KQCIEKYGEG KWHLVPVSAG LNRCRKSCRL RWLNYLKLDM 60 AKRPNIKRGN FVADEVDLML RLHKLLGNRW SLIAGRLPGR TANDVKNYWN THLLKKGSSR 120 ITKLKEKPQD MVKVNVIKPQ PRILSKNLTW LSGKPAIVES FQKKEDIRDI SQTLMQSEGR 180 INWWESLSNC GELDERATCT QCGRLNEVPK ETFWAEEIVP EAKVVEDSLD EDVLNYWGDF 240 SLDMDLWEVL NAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-63	MYB family protein