PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913339.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 193aa    MW: 21745.9 Da    PI: 8.8248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913339.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.12.5e-144797156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    + ykGVr  +++g+Wv+e+r p+e   + r++lg++  +++Aaka++ a+++l+ge
  XP_023913339.1 47 PVYKGVR--ERNGKWVCELRQPKE---KSRIWLGTWPCPDMAAKAYDVAALALKGE 97
                    68****6..679*********966...5*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MALIEGSSPT NSDIMYQQCT SHLQTQPQSG MQKRKAGRKK FQETRHPVYK GVRERNGKWV  60
CELRQPKEKS RIWLGTWPCP DMAAKAYDVA ALALKGESAS LNFPDAACVL PRVKSSSSIR  120
DIQCAATKAA QAFPCVKSSS SRKLFLDEEE LFNMPRLLDS MAEGLIITPL SMQKGFNWDD  180
LENNTMDLTL WRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.11e-37ERF family protein