PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913533.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 257aa    MW: 28190.5 Da    PI: 9.1223
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.21.3e-19176210135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  XP_023913533.1 176 CQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRL 210
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MELDKAARFV EDLLNFESDV GEEDEEDDKR AIVEEELEWI SNKDSFPALE SFILSEDPGT  60
TLSKHNSPVS VLENSSTSSN SNSNSNSTNS NSNGSSKNNN KSLMSCCGDS FKVPGRARSK  120
LCRRLRRDNQ LFWSQQAAAA NKIVKAEREV LTMRTTTTTT TAAATTTTTT TIGRKCQHCG  180
AEKTPQWRAG PLGPKTLCNA CGVRYKSGRL VPEYRPASSP TFSPKMHSNS HRKIVEMRRQ  240
KGMGAGMGMV VKSVDKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.13e-49GATA family protein