PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913619.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 254aa    MW: 29351.9 Da    PI: 8.8357
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM81.22.2e-25581952128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.......kvkaeek..ewyfFskrdkkyatgkrknratksgyWk. 84 
                     p G+rF Ptdeelv +yL +kv g +++++  i+e d+y  ++ePw++ +       +  ++++  e+ fF++ ++ ++t++r +r++ +g Wk 
  XP_023913619.1  58 PEGYRFCPTDEELVLYYLYRKVIGATTHEDGRIPEHDLYapNTEPWKIWAafggpnlE--ENKEelELLFFTRLKRVSSTDSRIKRTIGNGCWKg 150
                     89************************999888*****994458*****7446777432..33332488*************************98 PP

             NAM  85 .atgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      a+gk  +v+ +  +++ +g kkt+ + +   ++  + +W++he +l
  XP_023913619.1 151 nASGKYAKVVLEtlTRTRIGFKKTFHYKSD--ESKDNNRWILHELSL 195
                     889999999888788888*******99844..444699******876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
IGDMVVCRLR KHPKKEEIIP RTHASSQASQ NTKLMLEFLL ELLQSNSREI TMVPTMIPEG  60
YRFCPTDEEL VLYYLYRKVI GATTHEDGRI PEHDLYAPNT EPWKIWAAFG GPNLEENKEE  120
LELLFFTRLK RVSSTDSRIK RTIGNGCWKG NASGKYAKVV LETLTRTRIG FKKTFHYKSD  180
ESKDNNRWIL HELSLDKSLL LQAKIEDLVV CRLRKHLKKE AITPDTKVSS LATNLMLDYW  240
KLDSGEILFD PPIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.17e-13NAC family protein