PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913916.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 243aa    MW: 27875.2 Da    PI: 6.3738
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1522.9e-4741351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     lppGfrF Pt+eelv++yL++k+egk+ ++++vi+ + iy++ePw+Lpk    +++a++++w+fF++r++++a+g r++r+t+sgyWkatg+   
  XP_023913916.1   4 LPPGFRFYPTEEELVSFYLHNKLEGKRPDVKRVIPVISIYDIEPWHLPKlsgeMCQADTEQWFFFTPRQEREARGGRPSRTTESGYWKATGSPGY 98 
                     79****************************99****************667766667888*********************************** PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     v+s++++++g+kkt+vfykg+ap+g+kt+W m+eyr+
  XP_023913916.1  99 VYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMNEYRA 135
                     ***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MEQLPPGFRF YPTEEELVSF YLHNKLEGKR PDVKRVIPVI SIYDIEPWHL PKLSGEMCQA  60
DTEQWFFFTP RQEREARGGR PSRTTESGYW KATGSPGYVY SSDNRVIGVK KTMVFYKGKA  120
PTGRKTKWKM NEYRAIEEVP SSSSAVVPKL RHEFSLCRVY VVSGSLRAFD RRPEMSTRET  180
PQLGDNEAAT SSQNTTMVEK TSSSETSHSG GDHVDLPEID GFNWGINDGL EQPLWEWEQL  240
NWP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.11e-102NAC family protein