PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913936.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 223aa    MW: 25425.2 Da    PI: 5.6133
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913936.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.83.9e-16115159347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++++ +q+G+g+W++I+r+  k Rt+ q+ s+ qky
   XP_023913936.1 115 PWTEEEHRLFLHGLQQFGKGDWRSISRKAVKSRTPTQVASHAQKY 159
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MSLAQNISNQ SSIGDSSSWS RVQDKVFEEA IVVFPEGTQD RWEKIATQVL GKSPLEVRRH  60
YEVLVHDLLE IDSGRVELPS YEDEFDTVGQ GSEYSEGPVD FGSKAKETQR RRGVPWTEEE  120
HRLFLHGLQQ FGKGDWRSIS RKAVKSRTPT QVASHAQKYF LRQNSVKKER KKCSIHDITT  180
VEEAANSVGL GQINDQIWEM GPAIHLYDQQ SLEEHNEGFG FSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.13e-69MYB family protein