PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914115.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 398aa MW: 45556.7 Da PI: 7.1941

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.2	8.4e-21	99	187	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA+++GFsvrk+ k+ + g+i++rtf Cskeg+r +k++ e+++ + + +rtgC +++ +++kdg +v +++ +HnHe+ap XP_023914115.1 99 EFYKDYAHRIGFSVRKHFVKRG-NVGQIIRRTFSCSKEGERVFDKRR-ENASYRCPISRTGCLVQMTCHLQKDGMLHVVSFHGQHNHEFAP 187 6************9988776.8888************9999.9999999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MMDTSQIILL EDELNGCIAD QQDKAQVEPT HGSPNKSNTP SKYSKEIVEV PEIVLEDEFI 60 GWIPDQQEKA KVEITPGSPN KSNTPAIGMK FDCDDSAYEF YKDYAHRIGF SVRKHFVKRG 120 NVGQIIRRTF SCSKEGERVF DKRRENASYR CPISRTGCLV QMTCHLQKDG MLHVVSFHGQ 180 HNHEFAPSPM KHMLRSKRKI SLAQKAIAND AERSGISIKQ TIELLSMQAG GRENLEFMDV 240 DYKNHVHNER RMVLRKGDGP AMMEFFHKMQ LVDPSYFYSI QVDDDGQIMN IFWADTRSIV 300 DYGNFGDVIC FDTTYRTNRY DRPFAPFVGV NHHKQSIIFG AALLYDETIE SFKWLFETFL 360 TAMSGKQPRT ILTDQSAAMA KAITENTRSN IVKEFKST

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MMDTSQIILL EDELNGCIAD QQDKAQVEPT HGSPNKSNTP SKYSKEIVEV PEIVLEDEFI  60
GWIPDQQEKA KVEITPGSPN KSNTPAIGMK FDCDDSAYEF YKDYAHRIGF SVRKHFVKRG  120
NVGQIIRRTF SCSKEGERVF DKRRENASYR CPISRTGCLV QMTCHLQKDG MLHVVSFHGQ  180
HNHEFAPSPM KHMLRSKRKI SLAQKAIAND AERSGISIKQ TIELLSMQAG GRENLEFMDV  240
DYKNHVHNER RMVLRKGDGP AMMEFFHKMQ LVDPSYFYSI QVDDDGQIMN IFWADTRSIV  300
DYGNFGDVIC FDTTYRTNRY DRPFAPFVGV NHHKQSIIFG AALLYDETIE SFKWLFETFL  360
TAMSGKQPRT ILTDQSAAMA KAITENTRSN IVKEFKST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-69	FAR1 family protein