PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914139.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CPP

Protein Properties

Length: 617aa MW: 67521.8 Da PI: 8.3546

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44	4.4e-14	152	191	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnC+ s+Clk+YCeCfaag +C++ C+C +C+N+ e+ XP_023914139.1 152 KQKQCNCRSSRCLKLYCECFAAGIYCDN-CNCLNCQNNVEN 191 89***********************9.******9875 PP
2	TCR	50.1	5.4e-16	236	275	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a++ Cse+CkC +CkN e XP_023914139.1 236 KHSKGCQCKKSGCLKKYCECFQANVLCSENCKCMECKNFE 275 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MEKDDETNSD SAPKKSARQL DFSPQKPQPQ LQMRSQSLSQ PQPQQQPLSP VQLQLQLQLQ 60 LQSQSQLQLR PHAPMLPQLQ PRPPPPPPMS PQWHVQLPLP PLSPQLQPRP PQQPVLRSHP 120 VHKLPIPAVT KQESPRPKPR ANAEAKDSTP KKQKQCNCRS SRCLKLYCEC FAAGIYCDNC 180 NCLNCQNNVE NEAARQEAVG VTLERNPNAF RPKIASSPHE PRDSREDVAE VQVVGKHSKG 240 CQCKKSGCLK KYCECFQANV LCSENCKCME CKNFEGSQER RDLIHEDHNA MANIQQAKLA 300 NAAISGAIGS FGYGTPLVPR KRKSHELCQR ENHLRASSIP DSCIANAAVS GSSNFKYRST 360 LANILQPQDV KDLCSHLVEL SAEATMTRTG NSGKMDRETD RKNIEISTAL STQESEVAEN 420 GHGSQKAIPG NHLSRNQVDR DGSTDSGSDG VDMDNGRPMS PGTLALMCDE QDTMFMDGGS 480 PKGVLSDGQN TRQKSSNGHG SELYAEQERL VLARLRDFLN RIIACGSIRE TMPSPVAKNG 540 TGSQQKPVEN GNVKSGSEAR SHKEAYGNGI TKSPVTASAE ASSRAHPVTS DNKDLSSKVG 600 LPNGNGEKIK PNTDREL

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MEKDDETNSD SAPKKSARQL DFSPQKPQPQ LQMRSQSLSQ PQPQQQPLSP VQLQLQLQLQ  60
LQSQSQLQLR PHAPMLPQLQ PRPPPPPPMS PQWHVQLPLP PLSPQLQPRP PQQPVLRSHP  120
VHKLPIPAVT KQESPRPKPR ANAEAKDSTP KKQKQCNCRS SRCLKLYCEC FAAGIYCDNC  180
NCLNCQNNVE NEAARQEAVG VTLERNPNAF RPKIASSPHE PRDSREDVAE VQVVGKHSKG  240
CQCKKSGCLK KYCECFQANV LCSENCKCME CKNFEGSQER RDLIHEDHNA MANIQQAKLA  300
NAAISGAIGS FGYGTPLVPR KRKSHELCQR ENHLRASSIP DSCIANAAVS GSSNFKYRST  360
LANILQPQDV KDLCSHLVEL SAEATMTRTG NSGKMDRETD RKNIEISTAL STQESEVAEN  420
GHGSQKAIPG NHLSRNQVDR DGSTDSGSDG VDMDNGRPMS PGTLALMCDE QDTMFMDGGS  480
PKGVLSDGQN TRQKSSNGHG SELYAEQERL VLARLRDFLN RIIACGSIRE TMPSPVAKNG  540
TGSQQKPVEN GNVKSGSEAR SHKEAYGNGI TKSPVTASAE ASSRAHPVTS DNKDLSSKVG  600
LPNGNGEKIK PNTDREL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	321	325	KRKSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-115	CPP family protein