PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023914235.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 392aa    MW: 44685.4 Da    PI: 8.2767
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023914235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.82.3e-19341121397
                     TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                      +rlv+pk+f ++ +  k+ ++  tl+ +sg +W+v+l  + +++++++  GW++Fvk++ L+e D +vF+++g s+f   v ++
  XP_023914235.1  34 DRRLVIPKTFSDNLK--KKLPQSATLKGPSGLTWDVEL--TTNDDTMFFNHGWQKFVKDHSLEETDLLVFRYNGWSQF--DVLIL 112
                     568*******85555..458889***************..9*******************************976888..66655 PP
2B353.35e-17261355196
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelv 93 
                     f+ v+ p +v k++ l++p + + +h +k+++  ++ l+  +  +W+ k+ y++++g   +t+GWk+Fv +n+L+e D+++Fk  +r   +f l 
  XP_023914235.1 261 FQVVMRPTHVYKRHFLWIPAEWVMNHPLKENQ--EIYLRF-NEGTWQAKYFYNRGRGNGGITSGWKHFVLDNNLEEFDVCLFKPADRmdGSFVLD 352
                     88999*********************999666..688766.5579*******99999999***********************776623445455 PP

                     EEE CS
              B3  94 vkv 96 
                     v++
  XP_023914235.1 353 VSI 355
                     555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MGDACKDWSK WAEDIYWTHF QTFHFYQFLL SGFDRRLVIP KTFSDNLKKK LPQSATLKGP  60
SGLTWDVELT TNDDTMFFNH GWQKFVKDHS LEETDLLVFR YNGWSQFDVL ILDGKNLCEK  120
GASYFVRKCG QTEHDNRCST KKRLREGSMD DVHTPLDVDA GCTSPVNSMG DDSVTVPSEQ  180
YINSLVANKR TRQSARHVGS KKPATNGEGV KSNPSDDAAD SPTKKNGAQV QQFASNRRPV  240
TEDEIKSALV LAQAASSDDT FQVVMRPTHV YKRHFLWIPA EWVMNHPLKE NQEIYLRFNE  300
GTWQAKYFYN RGRGNGGITS GWKHFVLDNN LEEFDVCLFK PADRMDGSFV LDVSIFRVVQ  360
EIAPLTVLTP PKRGRPKSIK STKPQACDTY KM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-85B3 family protein