PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914407.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 507aa MW: 58035.7 Da PI: 7.616

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2.1e-11	331	375	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + Er+RR+++N++f+ Lr+ lP+ +K +Ka+ L + eY++sL XP_023914407.1 331 HMISERKRREKLNESFQALRSFLPPG-----TKKDKASLLATTREYLSSL 375 8899******************97.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MDKAFLFDES SRANFFQLIM QSIPYTYICL WSNWPQPSSC LRYLDGFFYE ENNQPSSSSG 60 TPARMLFEEY RQSVFMVENE CVPGLAFKNS RPYLELQEVH LQRFASKEVQ RQFYQTAIFM 120 GCKSGEIEIG FSNVPAEIDI EKELRSWFAE DFSRQFSPLR LPDQNPPSSS SSLSMDSPEY 180 SSLLFNIPNT THLPETLREV VNPTLQQIPT PSPHQAAMQA YARLQNIQLP NPETEAAAIT 240 RAIFNVLTSP SSSSSSQQPH TNLPYSHQVV SKFSAFKRYA SHLGPRTTQV RANLGRQSMM 300 KRSFAFFKSL NYLRVSARIQ ANRPTTTQLH HMISERKRRE KLNESFQALR SFLPPGTKKD 360 KASLLATTRE YLSSLKAQVE ELNRKNQLLE AHRLPAKEAK EEETSSSNER LIVRTSQVSE 420 STSSEERIVD LQVIIRGECP MVDILIRILE FLKQVENVSL QSMETNTRII ESSSLNHIIL 480 RLRIEGPEWD ESAFQEAVRR VVADLAP

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MDKAFLFDES SRANFFQLIM QSIPYTYICL WSNWPQPSSC LRYLDGFFYE ENNQPSSSSG  60
TPARMLFEEY RQSVFMVENE CVPGLAFKNS RPYLELQEVH LQRFASKEVQ RQFYQTAIFM  120
GCKSGEIEIG FSNVPAEIDI EKELRSWFAE DFSRQFSPLR LPDQNPPSSS SSLSMDSPEY  180
SSLLFNIPNT THLPETLREV VNPTLQQIPT PSPHQAAMQA YARLQNIQLP NPETEAAAIT  240
RAIFNVLTSP SSSSSSQQPH TNLPYSHQVV SKFSAFKRYA SHLGPRTTQV RANLGRQSMM  300
KRSFAFFKSL NYLRVSARIQ ANRPTTTQLH HMISERKRRE KLNESFQALR SFLPPGTKKD  360
KASLLATTRE YLSSLKAQVE ELNRKNQLLE AHRLPAKEAK EEETSSSNER LIVRTSQVSE  420
STSSEERIVD LQVIIRGECP MVDILIRILE FLKQVENVSL QSMETNTRII ESSSLNHIIL  480
RLRIEGPEWD ESAFQEAVRR VVADLAP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	335	340	ERKRRE
2	336	341	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-71	bHLH family protein