PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914626.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 679aa MW: 79124.1 Da PI: 8.6651

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.1	3.4e-24	34	122	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +f+ +Y++++GF+vrk++ +ksk++g+i++r+fvC k+g r +ekk+ + r+r trt+C kl v++ + +gk++v+++ ++HnH+l XP_023914626.1 34 EFWLKYGRQMGFDVRKHYINKSKKDGKIISRRFVCAKQGIRGPEKKD-VICTRNRDDTRTNCPVKLYVSLVReTGKYKVIDFIEKHNHTL 122 69******************************************9.9999**************999*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MDVNEDLSPR VMDANEDLSP RVGMEFDTLK DAWEFWLKYG RQMGFDVRKH YINKSKKDGK 60 IISRRFVCAK QGIRGPEKKD VICTRNRDDT RTNCPVKLYV SLVRETGKYK VIDFIEKHNH 120 TLHLSKTVYM MRSQRKISEV LAGLIELASS SGIKPKAALE LMSREAGGRA NLRFTEIDQQ 180 NYLRTRRQKN MIYGQAACLL GYFQKQLTTN PSFQYAVQLD NVDQITNIFW ADARMIIDYA 240 NFGDVMTFNT AYGTNKELRP LGVFTSFNHH GGLTVFRAAL LYDETAESFK WLFETFLVAH 300 ASKRPKTILT DQDPAMAKAL SEVMPNTYHG LCTWHIMQNG IKHLGNLMKD GSSFLQVFKT 360 CMFEFNDEIE FEKTWEDMID TYAIHDRSWL DTIYKLKGKW AKCYMKNEFT LGIRSTQLSE 420 SLNGDLKDYL RPDLDVAEFF EHFDRVIEQK RERELQAKFN ARQKFPQLSL KNSPLLKQVV 480 QVYTPVIFRI LQDQYDLASA TRIKNRQEDL LMHTYTIEFM HKPSEFIVSY DTADKTFSCS 540 CRKFEIVGIL CCHVLKVFDF LDIKTIPNMY ILKRWTREAK SGCILDNRRT NVEEDVNLSV 600 TQRYRKLCPK LVRLASQVAD NEDAFALIEK MIEEYGKKVE DIVAKKVVGH SLPHQMPLCS 660 NAENLDPNHI WKIWLKEQQ

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MDVNEDLSPR VMDANEDLSP RVGMEFDTLK DAWEFWLKYG RQMGFDVRKH YINKSKKDGK  60
IISRRFVCAK QGIRGPEKKD VICTRNRDDT RTNCPVKLYV SLVRETGKYK VIDFIEKHNH  120
TLHLSKTVYM MRSQRKISEV LAGLIELASS SGIKPKAALE LMSREAGGRA NLRFTEIDQQ  180
NYLRTRRQKN MIYGQAACLL GYFQKQLTTN PSFQYAVQLD NVDQITNIFW ADARMIIDYA  240
NFGDVMTFNT AYGTNKELRP LGVFTSFNHH GGLTVFRAAL LYDETAESFK WLFETFLVAH  300
ASKRPKTILT DQDPAMAKAL SEVMPNTYHG LCTWHIMQNG IKHLGNLMKD GSSFLQVFKT  360
CMFEFNDEIE FEKTWEDMID TYAIHDRSWL DTIYKLKGKW AKCYMKNEFT LGIRSTQLSE  420
SLNGDLKDYL RPDLDVAEFF EHFDRVIEQK RERELQAKFN ARQKFPQLSL KNSPLLKQVV  480
QVYTPVIFRI LQDQYDLASA TRIKNRQEDL LMHTYTIEFM HKPSEFIVSY DTADKTFSCS  540
CRKFEIVGIL CCHVLKVFDF LDIKTIPNMY ILKRWTREAK SGCILDNRRT NVEEDVNLSV  600
TQRYRKLCPK LVRLASQVAD NEDAFALIEK MIEEYGKKVE DIVAKKVVGH SLPHQMPLCS  660
NAENLDPNHI WKIWLKEQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1 family protein