PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914719.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 488aa MW: 56914.8 Da PI: 7.8771

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.4	4.3e-22	29	117	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++++GFs+rk++ +k k++g +t+r fvC keg r ++k++ ++ +++raetr+g +a+l++ +++ ++k+ +++ eHnH l XP_023914719.1 29 DFYNEYGRKAGFSIRKEYVNKCKKTGVVTSRIFVCAKEGVRGKDKRD-QNVKNPRAETRCGYEARLVIILNRdSKKYAASEFIAEHNHYL 117 6*****************************************999.999*************999989************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MEIHVPSNVP MESTPFKGME FEADEIAYDF YNEYGRKAGF SIRKEYVNKC KKTGVVTSRI 60 FVCAKEGVRG KDKRDQNVKN PRAETRCGYE ARLVIILNRD SKKYAASEFI AEHNHYLHLP 120 STVHMMPSQR KVAATHAIEI DLAHESGLRL KQSYELLSKQ VGGYDNLGFT KQDHKNYLRT 180 KRQKDMEHGA AASLGRYFSR QLKENPSYYF ATQLDCEELI TNIFWADARM IIDYNHFGDV 240 ITFDTTYSTN RDARPFGVFL GLNHHRETVV FGGALLYDET IESFVWLFET FLEAMSEKKP 300 ITIFKDQDAA MSAAIKVVMP KTYHALCSWH MWQNAEKHLG HLLKNESQFN SNFLACIYEY 360 DSEDEFLTAW NEMLDKYDVR ENKWLIDLFK LKKKWAQAYV KRTFTAGMKT TQLSESFNAD 420 LKDCLRTDLN IVEFFTHFET VVNQKRDKEL EAEYNSRQKF PRLKLKSSPM LNQVATVYTP 480 KLFDLFQT

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MEIHVPSNVP MESTPFKGME FEADEIAYDF YNEYGRKAGF SIRKEYVNKC KKTGVVTSRI  60
FVCAKEGVRG KDKRDQNVKN PRAETRCGYE ARLVIILNRD SKKYAASEFI AEHNHYLHLP  120
STVHMMPSQR KVAATHAIEI DLAHESGLRL KQSYELLSKQ VGGYDNLGFT KQDHKNYLRT  180
KRQKDMEHGA AASLGRYFSR QLKENPSYYF ATQLDCEELI TNIFWADARM IIDYNHFGDV  240
ITFDTTYSTN RDARPFGVFL GLNHHRETVV FGGALLYDET IESFVWLFET FLEAMSEKKP  300
ITIFKDQDAA MSAAIKVVMP KTYHALCSWH MWQNAEKHLG HLLKNESQFN SNFLACIYEY  360
DSEDEFLTAW NEMLDKYDVR ENKWLIDLFK LKKKWAQAYV KRTFTAGMKT TQLSESFNAD  420
LKDCLRTDLN IVEFFTHFET VVNQKRDKEL EAEYNSRQKF PRLKLKSSPM LNQVATVYTP  480
KLFDLFQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-114	FAR1 family protein