PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023914850.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 245aa    MW: 27073.2 Da    PI: 7.0361
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023914850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.41.5e-144996254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +r+h+e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L ++v+++k+L
  XP_023914850.1 49 CRSHKEAERRRRQRINAHLSTLRTLLPNT-----TKTDKASLLAEVVHHVKEL 96
                    789*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MLPFQSYYGF DQQEKMSHEP PNLVVSLMDG GDSTMSSASK VERKSEEACR SHKEAERRRR  60
QRINAHLSTL RTLLPNTTKT DKASLLAEVV HHVKELRKRA DDMAKQDGDT WVFPSESDEA  120
SLSYCDGDDD GGDNNNNNNS KEMKATLCCE DRPGLNVDLA RAIRAGRARA VRAEMMTVGG  180
RTKSVVVVKW AESVGGEEEF GALKRALKAV VENRVSDSGL GRVVSGSKRA RVYGSGNEEG  240
DKEFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.17e-29bHLH family protein