PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023914927.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family CPP
Protein Properties Length: 165aa    MW: 18556.3 Da    PI: 9.2038
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023914927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR45.61.4e-1489127241
             TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                     +kk+C+Ck+skClk+YCeCfa g +C+  CkC +C N+ e
  XP_023914927.1  89 RKKHCTCKHSKCLKLYCECFAGGIYCDG-CKCANCYNDVE 127
                     689*************************.********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MEETENIDFP PKRPRSVGAT RKTVTEASVA FPRKNRIRQL DFTEFPVKPI SVVPHSRLPP  60
RIPLSTINSE SPRSRPQLNI NGSNDTPKRK KHCTCKHSKC LKLYCECFAG GIYCDGCKCA  120
NCYNDVENED VRIAAIEGIL ERNPSAFKPK IANSPLKTLD NRVDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.11e-37CPP family protein