PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914975.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MIKC_MADS

Protein Properties

Length: 142aa MW: 16451.2 Da PI: 10.5802

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914975.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.1	1.1e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri+n++ rqvtfskRrng+lKKA+ELS+LC+aev +iifsstg+ly+ys+ XP_023914975.1 9 KRIDNSTSRQVTFSKRRNGLLKKAKELSILCEAEVGLIIFSSTGRLYDYSN 59 79***********************************************95 PP
2	K-box	53.3	1.2e-18	82	141	10	69
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 +++ + +q+e+a L++++ q+ +R+llG +L +L++k+Lq+Le+ Le slk iR kK XP_023914975.1 82 PASEVKFWQREAASLRQQLLHVQECNRQLLGHELANLNIKDLQNLENTLEMSLKGIRIKK 141 567899***************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGRGKIVIKR IDNSTSRQVT FSKRRNGLLK KAKELSILCE AEVGLIIFSS TGRLYDYSNT 60 SMKSVIERYK KLKEEHHQLM NPASEVKFWQ REAASLRQQL LHVQECNRQL LGHELANLNI 120 KDLQNLENTL EMSLKGIRIK KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14210.1	9e-71	MIKC_MADS family protein