PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023915119.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 265aa    MW: 29569.3 Da    PI: 9.5901
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023915119.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.78.5e-08168208954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_023915119.1 168 ARHRRERIGERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 208
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDGDMLKSLT DQDHMDVMTM MMQMEKLPEF CDPFHNTPIP IYPEIEFTSG STSNIATNTP  60
PIIHNPNVAP VPHTLMNPSS SIPLMGTPIQ DPMTPSLQPH VMSGRFRFNN VGALSLANTY  120
EKKDSVAAMR EMIFRIAAMQ PIHIDPESIK PPKRRNVKIS KDPQSVAARH RRERIGERIR  180
ILQRLVPGGT KMDTASMLDE AIHYVKFLKK QVQKLEQAEA NRTINGVGLP AVGMTRGGVN  240
YATLMKAYQR PACSNGGVYA DLMSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.14e-43bHLH family protein