PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915163.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GeBP

Protein Properties

Length: 379aa MW: 42691.9 Da PI: 4.9855

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915163.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	105	5.9e-33	125	220	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 l+qr+w++eDei lL+G +df++++g+ ++ +++fy++++++++++++k+ql++K+r+LK+K+k+ +k++ +ke+sf+++h+q fe+s+kiW XP_023915163.1 125 LIQRIWTNEDEIELLRGYLDFTTQRGSTNHNVTKEFYDQIRSKLQVEFNKNQLSDKLRKLKRKYKRILEKINPDKEFSFKTAHEQARFEISRKIW 219 68********************************************************************************************* PP DUF573 97 g 97 g XP_023915163.1 220 G 220 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MLSSLVGWII PSSSSSSSSS SQYDEKEDDD TKNDSISAKP IDSIDESIEN PKIPVGIAVR 60 STPIVTIALP AATAAAPIGK PPITATTTTT TIIVNSKRQR VENENKNDAW AMQEEKRHVD 120 YSRRLIQRIW TNEDEIELLR GYLDFTTQRG STNHNVTKEF YDQIRSKLQV EFNKNQLSDK 180 LRKLKRKYKR ILEKINPDKE FSFKTAHEQA RFEISRKIWG DIVGRIGVED NMLDEDEPSS 240 SLNDINLVNV KVEDEEVMGG FRPWKRPKSV SGLKINEKHV SNNGTLPDDI ENGNNDVASL 300 IEDTVKSLSP LFQELLSNAL SPTQLSPDGV STTNMQSGEG VDEKWKEQKI KELEVYSKRL 360 ELVQDQIKAT LEELKSMGG

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MLSSLVGWII PSSSSSSSSS SQYDEKEDDD TKNDSISAKP IDSIDESIEN PKIPVGIAVR  60
STPIVTIALP AATAAAPIGK PPITATTTTT TIIVNSKRQR VENENKNDAW AMQEEKRHVD  120
YSRRLIQRIW TNEDEIELLR GYLDFTTQRG STNHNVTKEF YDQIRSKLQV EFNKNQLSDK  180
LRKLKRKYKR ILEKINPDKE FSFKTAHEQA RFEISRKIWG DIVGRIGVED NMLDEDEPSS  240
SLNDINLVNV KVEDEEVMGG FRPWKRPKSV SGLKINEKHV SNNGTLPDDI ENGNNDVASL  300
IEDTVKSLSP LFQELLSNAL SPTQLSPDGV STTNMQSGEG VDEKWKEQKI KELEVYSKRL  360
ELVQDQIKAT LEELKSMGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	182	190	RKLKRKYKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	5e-48	GeBP family protein