PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915169.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GeBP

Protein Properties

Length: 303aa MW: 34730 Da PI: 5.794

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	105.6	3.9e-33	152	247	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 l+qr+w++eDei lL+G +df++++g+ ++ +++fy++++++++++++k+ql++K+r+LK+K+k+ +k++ +ke+sf+++h+q fe+s+kiW XP_023915169.1 152 LIQRIWTNEDEIELLRGYLDFTTQRGSTNHNVTKEFYDQIRSKLQVEFNKNQLSDKLRKLKRKYKRILEKINPDKEFSFKTAHEQARFEISRKIW 246 68********************************************************************************************* PP DUF573 97 g 97 g XP_023915169.1 247 G 247 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MQPPIELDKH QPLFIKTIHI FSLKCMKMLS SLVGWIIPSS SSSSSSSSQY DEKEDDDTKN 60 DSISAKPIDS IDESIENPKI PVGIAVRSTP IVTIALPAAT AAAPMGKPPI TATTTTTTII 120 VNSKRQRVEN ENKNDAWAMQ EEKRHVDYSR RLIQRIWTNE DEIELLRGYL DFTTQRGSTN 180 HNVTKEFYDQ IRSKLQVEFN KNQLSDKLRK LKRKYKRILE KINPDKEFSF KTAHEQARFE 240 ISRKIWGDIV GRIGVEDNML DEDEPSSSLN DINLVNVKVE DEEVMGGFRP WXFGLREREG 300 EVE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	209	217	RKLKRKYKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	3e-30	GeBP family protein