PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915170.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GeBP

Protein Properties

Length: 339aa MW: 39125 Da PI: 5.145

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	56.2	1e-17	120	178	39	97
DUF573 39 efvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++++++++++++k+ql++K+r+LK+K+k+ +k++ +ke+sf+++h+q fe+s+kiWg XP_023915170.1 120 NQIRSKLQVEFNKNQLSDKLRKLKRKYKRILEKINPDKEFSFKTAHEQARFEISRKIWG 178 689*******************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MVENVTKKVK KALVRMYEHY CDCDGYSNGQ GQDGSSSNNV ETRPVQDPHA LVKSIYKMHL 60 AVDSLENKLE VERYLADCVE EDSPNFCILN WWKNWLRATD IIDLQESMEE VESYKGLESN 120 QIRSKLQVEF NKNQLSDKLR KLKRKYKRIL EKINPDKEFS FKTAHEQARF EISRKIWGDI 180 VGRIGIEDNM LDEDDLSSSL NDVNLVNVKV EDEEVMGDFR PWKRPKSLSG LKINEKHVLN 240 NGTLPNDIEN GNNEVASLIE DTVKSLSPSF QELLSQSLSP TQMSPDGVST TNMKGGEGVD 300 EKWKEQKIKE LEVYSKRLEL VQDQIYTPFR WSENRRGGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	148	RKLKRKYKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-18	GeBP family protein