PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915474.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

SRS

Protein Properties

Length: 207aa MW: 23264.3 Da PI: 9.1578

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	178.6	2.7e-55	8	143	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasska.aasaaeaaskrkrelkskkqsalsstklssaes 96 +g+++CqdCGnqakk+C+++RCRtCCk++gf+C+thvkstW+p ++rr+rqq+++++ + ++ + +++kr+r+ +s XP_023915474.1 8 MGASRCQDCGNQAKKECVYMRCRTCCKNKGFQCETHVKSTWIPLYRRRQRQQHQQQQLAAVlPQELQGHSPKRHRQI-------------HSP-- 87 57889*******************************************887766433330333344444444443.............222.. PP DUF702 97 kkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +e +++P+ev+s+a frc+rvss+dd+++e+a+qtav+igGhvf+G+LydqGle+ XP_023915474.1 88 --GSEEAKFPAEVQSMATFRCIRVSSMDDADDEYAFQTAVTIGGHVFRGVLYDQGLES 143 ..345678*********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MRQQGGLMGA SRCQDCGNQA KKECVYMRCR TCCKNKGFQC ETHVKSTWIP LYRRRQRQQH 60 QQQQLAAVLP QELQGHSPKR HRQIHSPGSE EAKFPAEVQS MATFRCIRVS SMDDADDEYA 120 FQTAVTIGGH VFRGVLYDQG LESRHTSTVG ESSSSRAHLQ PNNLLNAATL ATITSNSAST 180 EQFLPPSYPF SLNAFMPGMQ FLPRPRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	3e-51	SRS family protein