PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023915521.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 148aa    MW: 16608.6 Da    PI: 5.9584
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023915521.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB50.84e-1612105595
           NF-YB   5 drflPianvsrimkkvlPana...kiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                      ++lP + v r++k+ l +++    + kda     e +  fi ++++ a+d c++ kr+tin+dd+l al ++ f +++ plk+ l+++r+ ++
  XP_023915521.1  12 AEELPRTIVRRVVKEKLCNDCddmSVHKDALLAFSESARIFIHYLSATANDICKESKRQTINADDVLTALQEIEFSHFLGPLKASLHEFRQKNA 105
                     56799999*********876522269999999**********************************************************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MESENQKVIS EAEELPRTIV RRVVKEKLCN DCDDMSVHKD ALLAFSESAR IFIHYLSATA  60
NDICKESKRQ TINADDVLTA LQEIEFSHFL GPLKASLHEF RQKNAGKKAG AAKEKEEKKK  120
RKLEELSHDS GGGERVENED NQDGTGHA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113122KEKEEKKKRK
2118123KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.13e-39NF-YB family protein