PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023915564.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 373aa    MW: 41496.1 Da    PI: 4.8288
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023915564.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-102993391055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_023915564.1 299 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 339
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MEHIGAFPDG EWDSMSKMFK SEELDFTSQF LGQCSFLLEN DEGLNSRTPS NYFCPTSEAE  60
KGMSGVNDSL LFSLDYLNSN LQYVSQESSN SSHCSSSVFI ATPSHENYNY FSDATNHVPV  120
TNGIPLSMNN GIMDEKHVGS FLPTFPDIVM GESTVCIQED MNPEGLEKLD DVPGNKDLIL  180
KRKLDMPESY TKAEDKMIAH PSEKSKKKPR VSRDVQKSKK NVQSKKNQKA RPNGNHEEES  240
NAGPDGQSYA SYSSEDDNAS QETNEGATSE SQTPAALNLS GKTRASRGSA TDPQSLYARK  300
RRERINERLR ILQNLVPNGT KVDISTMLEE AVQYVKFLQL QIKLLSSDDL WMYAPIAYNG  360
MDVGLLNKIS PPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.16e-44bHLH family protein