PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915817.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GeBP

Protein Properties

Length: 389aa MW: 45331.7 Da PI: 4.3768

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	50.1	8e-16	278	367	7	97
DUF573 7 wseeD.eivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++ D ei +L +id+ +++ p+ d a+ +f+k+ ++++++++ql++ i +L+kK+k+ +k g ++fs +h q +f+l+++iW XP_023915817.1 278 LTDVDyEIGFLNCIIDYYHNNARYPYYDYIAVDDFIKNWLEVDATQRQLIDVILKLRKKYKETLAK--MGVAKKFSDPHHQRAFNLAQRIWT 367 5565559***********999*************************************99..99999****************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MSEQSERSPI QLQDMTPEKE AGQKQEVQKL QELPQQQQRE DDHEEEEEEH TSTSLKASHA 60 ITEQTREEQP REQEEKKEDD EDKEVGNITV SPPSETPFKQ SERFPIQDMT EENEEGQKQE 120 AQTLQELPQQ QQTEEEKEED TATSLNASHA GEQTIEEQPK EPEPGQEEEK EQEAQYLQEL 180 PQQQQREEEE EDTATSDYNA SNARGQEQGQ EDVDISSATL PLMMKMKMNK WRLSPVTPAK 240 RPAQKSDVKD EDCQGIKKKT RTKVTCDKPP TTFLESVLTD VDYEIGFLNC IIDYYHNNAR 300 YPYYDYIAVD DFIKNWLEVD ATQRQLIDVI LKLRKKYKET LAKMGVAKKF SDPHHQRAFN 360 LAQRIWTNSG FKEDWKNLKK SRFIASPFP

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MSEQSERSPI QLQDMTPEKE AGQKQEVQKL QELPQQQQRE DDHEEEEEEH TSTSLKASHA  60
ITEQTREEQP REQEEKKEDD EDKEVGNITV SPPSETPFKQ SERFPIQDMT EENEEGQKQE  120
AQTLQELPQQ QQTEEEKEED TATSLNASHA GEQTIEEQPK EPEPGQEEEK EQEAQYLQEL  180
PQQQQREEEE EDTATSDYNA SNARGQEQGQ EDVDISSATL PLMMKMKMNK WRLSPVTPAK  240
RPAQKSDVKD EDCQGIKKKT RTKVTCDKPP TTFLESVLTD VDYEIGFLNC IIDYYHNNAR  300
YPYYDYIAVD DFIKNWLEVD ATQRQLIDVI LKLRKKYKET LAKMGVAKKF SDPHHQRAFN  360
LAQRIWTNSG FKEDWKNLKK SRFIASPFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	2e-09	GeBP family protein