PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023916188.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 243aa    MW: 25988.4 Da    PI: 5.7812
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023916188.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.67.3e-1477125255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G   ++++g+Wv+eIr p++   ++r++lg++ t e+Aa a++ a+++l+g
  XP_023916188.1  77 KYRGA--RSRSGKWVSEIRQPRK---TTRIWLGTYPTREMAAVAYDVAALALKG 125
                     67777..4678*********843...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MPKNRANVRQ NNPYTHANVR REESTLNSNT TGAISASSSE TNTNPTTTAA TSTSPISESE  60
GSSGQSGSSS STANPKKYRG ARSRSGKWVS EIRQPRKTTR IWLGTYPTRE MAAVAYDVAA  120
LALKGPSTVL NFPNLILWYP IPASLNPSDI RAAAASAAEA MMQRSSEGSS GSSSSTSGHE  180
TAHRNRTEEE YVDEEELLNM PNLLVEMAEG MLLSPPRIQS KSSSDESGCD GNGDGDGLWS  240
YAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.17e-34ERF family protein