PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023916216.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 216aa    MW: 23100.3 Da    PI: 4.7642
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023916216.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.44.9e-1556105155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+G r  +++g+Wv+eIr p     r  +r++lg+f t+e+Aa+a++ a+++l+g
  XP_023916216.1  56 PKYRGAR--SRSGKWVSEIRQP-----RkpTRIWLGTFQTPEMAAAAYDVAALALKG 105
                     5788885..678*********8.....448************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MANVSQNDTS TPANVRREET TLTCNTSSST TTTTSTIPVS EGFSGQSGSP SPTQNPKYRG  60
ARSRSGKWVS EIRQPRKPTR IWLGTFQTPE MAAAAYDVAA LALKGPDTAL NFPNSILSYP  120
IPASMSPNDI RAAAACAAED RLRRSSEGSS TGQETTRRRR SEEEFVDEDA VLNMPNLLVD  180
MAEGMLVSPP RIQSKSSSDE SGGDGNGDGD GLWSYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-33ERF family protein