PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023916274.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 252aa    MW: 28087.7 Da    PI: 5.5708
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023916274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.41.3e-1823114199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +p    ++g +++p kf++++g +   s +  l+ ++g  W+vk+  +k++g++++++GW eF++ +gL +g  +vF+++g+s f  +v 
  XP_023916274.1  23 FFKIIMPRAL-QEGKIRIPTKFISKYGVD--LSDMAFLTIPNGTNWKVKV--TKHDGGVWFQNGWCEFASCHGLTVGHLLVFRYIGNSHF--HVL 110
                     7777766555.5566***********877..776778888**********..*************************************9..*** PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f++
  XP_023916274.1 111 IFDA 114
                     9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MASQWWRDNE DGPADLTMRS THFFKIIMPR ALQEGKIRIP TKFISKYGVD LSDMAFLTIP  60
NGTNWKVKVT KHDGGVWFQN GWCEFASCHG LTVGHLLVFR YIGNSHFHVL IFDATATEID  120
YTLDDQLQVC RMEDNESDDD SVEIMDGFTK GEGSGSDHRV GGNRVGCTSS SLVKVESDQC  180
PKKDGGVAEN LVRANALKSD NPLFTVTIHP SYIDGKDCAS LPWAIINYLP REGFTKDYSK  240
GSILTVKLQV VD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-30B3 family protein