PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023916320.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 291aa MW: 32084.5 Da PI: 8.2453

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023916320.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00044	225	247	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg Fs+ +L+ H + H XP_023916320.1 225 ECPQCGAKFSSVTTLVEHVEKvH 247 5*****************99888 PP
2	zf-C2H2	17.8	9e-06	263	285	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C++ F+++ +L++H + H XP_023916320.1 263 VCPKCSRGFRDPVSLVQHVERdH 285 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MGTPEFPDLG KHCSVDDCKL IDFLPFTCDR CRQVFCLEHR SYNKHSCPNA DRQDVTVVIC 60 PLCAKGVRLI PDEDPNITWE THVNTECDPS NYEKVTKKKK CPVPGCKDIL TFSNTIKCRD 120 CLVDHCLKHR FGPDHKCPGP KKSEAGFPFM GLLSRSRKEE SKPNRAPTSS SSAWATSILN 180 AASTVRASAE ASMSKLSSEI SQKWQIAKDG MGQSSSSSGG IGQEECPQCG AKFSSVTTLV 240 EHVEKVHERN GNRPGMKKVT IDVCPKCSRG FRDPVSLVQH VERDHGGTSR T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-133	C2H2 family protein