PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023916415.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 187aa    MW: 22062.5 Da    PI: 8.8586
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023916415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.56.1e-111910553128
             NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....kgel............vglkktLvfykgrapkgektdWvmheyrl 128
                     ++ + +yf++k + + ++gkr  rat+ g+Wka+    +v++     +  +            +g k+++ f  +r+    + +W+mheyrl
  XP_023916415.1  19 TGMQTLYFYTKLKGR-NKGKRVGRATEFGTWKAQND-VKVYDLdddeE--QervvfnkrqckhIGSKRSFSFV-ARKGFDANGRWTMHEYRL 105
                     244566888887765.589*************9966.55655545441..1456666777777**********.455555799*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MDCDVYGDPK IWRKHFERTG MQTLYFYTKL KGRNKGKRVG RATEFGTWKA QNDVKVYDLD  60
DDEEQERVVF NKRQCKHIGS KRSFSFVARK GFDANGRWTM HEYRLDGVFK SIRNDEEYVL  120
CQINKMEKQG RNTRENSLKK EETSQTGSTS ENFECPQPAN VQNPFQSSQD EGAQYSDKSP  180
LWSEIRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.13e-08NAC family protein