PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023916476.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 756aa MW: 87660.4 Da PI: 7.3672

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023916476.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.2	4.9e-27	29	114	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+eYAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++++gkw+++++++eHnHel p XP_023916476.1 29 FYKEYAKSVGFGTAKLSSRRSRASREFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRQNGKWYIYSFVKEHNHELLP 114 **************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 756 aa Download sequence
MDSNVIMDNA IVEPRGDMEF DSHEDAYTFY KEYAKSVGFG TAKLSSRRSR ASREFIDAKF 60 SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRQNGKWY IYSFVKEHNH ELLPAQAHFF 120 RSHRNADPLK NDVRVRRRKN LAAVSKLFSA YQNVDCLESY MRNQLDKGRS LVLEPGDAQI 180 LLEHFMQMQE ENPRFFYAVD LNEEHRLRNV FWVDAKGVED YTTFGDVVSF DTTYFTNKYK 240 IPLVFFIGVN HHIQPTLLGC ALIADETHFT FVWLMQTWLI AMGERAPRVI LSDQNNAIKA 300 AVAAIFPATH HCYCLWHVLE KIPRQLEFLS MWYDTFLAKF NKCIYKSWTE EQFERRWWKL 360 INRFNLRELE WVQSLYEDRT HWVPTFMKDL SFAGLSTPLR SESLNSVFDK YIQGETSLID 420 FMKRYREILE DRYEEEAKAN FDAWHETPEL KSPSPFEKQM SLVYTHEIFK KFQVEVLGAA 480 ACHLKKENED ETITIYTVKD FEDNQNYAVE WNESKLDIYC SCRSFEYKGY LCRHAIVVLQ 540 MSGVFNIPSK YILQRWTNAA KSRHSIGERL DEVQSKVRRF NDLCRRAIIL GEEGSLSPES 600 YNIALCAIKE ALKQCAIVNN PVENDTRNMT STTPAICAVE VNQFGNSSNE IVLDPKVTNG 660 NKAPRRAGAG KEVASNENSS SNKGKVPQPE AVNVGIQDGF LQMEMSDMRP AQLHNQFHNV 720 VPTQLHNLVP TMFHNVASTQ FHNVASTNLH ENRLPR

Sequence ? help Back to Top

Protein Sequence Length: 756 aa Download sequence

MDSNVIMDNA IVEPRGDMEF DSHEDAYTFY KEYAKSVGFG TAKLSSRRSR ASREFIDAKF  60
SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRQNGKWY IYSFVKEHNH ELLPAQAHFF  120
RSHRNADPLK NDVRVRRRKN LAAVSKLFSA YQNVDCLESY MRNQLDKGRS LVLEPGDAQI  180
LLEHFMQMQE ENPRFFYAVD LNEEHRLRNV FWVDAKGVED YTTFGDVVSF DTTYFTNKYK  240
IPLVFFIGVN HHIQPTLLGC ALIADETHFT FVWLMQTWLI AMGERAPRVI LSDQNNAIKA  300
AVAAIFPATH HCYCLWHVLE KIPRQLEFLS MWYDTFLAKF NKCIYKSWTE EQFERRWWKL  360
INRFNLRELE WVQSLYEDRT HWVPTFMKDL SFAGLSTPLR SESLNSVFDK YIQGETSLID  420
FMKRYREILE DRYEEEAKAN FDAWHETPEL KSPSPFEKQM SLVYTHEIFK KFQVEVLGAA  480
ACHLKKENED ETITIYTVKD FEDNQNYAVE WNESKLDIYC SCRSFEYKGY LCRHAIVVLQ  540
MSGVFNIPSK YILQRWTNAA KSRHSIGERL DEVQSKVRRF NDLCRRAIIL GEEGSLSPES  600
YNIALCAIKE ALKQCAIVNN PVENDTRNMT STTPAICAVE VNQFGNSSNE IVLDPKVTNG  660
NKAPRRAGAG KEVASNENSS SNKGKVPQPE AVNVGIQDGF LQMEMSDMRP AQLHNQFHNV  720
VPTQLHNLVP TMFHNVASTQ FHNVASTNLH ENRLPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein