PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023916485.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 406aa    MW: 44234.8 Da    PI: 5.8972
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023916485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.88e-13340385655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L++l+P+     +k  + a++L +AveYIk+Lq
  XP_023916485.1 340 SIAERVRRTRISERMRKLQDLVPNM----DKQTNTADMLDLAVEYIKDLQ 385
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MESDLQQHRH QNQMNSGLTR YRSAPSSYFA NIIDREFCEE FFNRPSSPET ERILTRFIAG  60
SGGGGNGGTE VTNTSEVAAT EASSQQTQFM ASMNNEAAGV LQQQQSNYGS ASQNFYQGPP  120
RPPLPNSSVE GSYSMGLDRL PQMKTGGGNN SSLIRHSSSP AGLFANINVG EGYAAMRGVG  180
NFGAGNSTNE EASFSSASRL KNYSSGPPSS SGLMSPIDEI EDKNMVVANN PESGCFGEGR  240
SSNYVTGFPL GSWDDSAMIS DNITGLKRLR DDDDVKSFSN INVSETQNVE AGNCPPPLAH  300
HLSLPKTSSE MAAIEKFLQF QDSVPCKIRA KRGCATHPRS IAERVRRTRI SERMRKLQDL  360
VPNMDKQTNT ADMLDLAVEY IKDLQQEVET LTDKHAKCTC SHKQQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.16e-82bHLH family protein