PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023916486.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 393aa    MW: 42800.2 Da    PI: 5.8936
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023916486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.7e-13327372655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L++l+P+     +k  + a++L +AveYIk+Lq
  XP_023916486.1 327 SIAERVRRTRISERMRKLQDLVPNM----DKQTNTADMLDLAVEYIKDLQ 372
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MESDLQQHRH QNQMNSGLTR YRSAPSSYFA NIIDREFCEE FFNRPSSPET ERILTRFIAG  60
SGGGGNGGTE VTNTSEVAAT EASSQQTQFM ASMNNEAAGV LQQQQSNYGS ASQNFYQGPP  120
RPPLPNSSVE GSYSMGLDRL PQMKTGGGNN SSLIRHSSSP AGLFANINVG EGYAAMRGVG  180
NFGAGNSTNE EASFSSASRL KNYSSGPPSS SGLMSPIDEI EDKNMVVANN PESGCFGEGR  240
SSNYVTGFPL GSWDDSAMIS DNITGLKRLR DDDDNVEAGN CPPPLAHHLS LPKTSSEMAA  300
IEKFLQFQDS VPCKIRAKRG CATHPRSIAE RVRRTRISER MRKLQDLVPN MDKQTNTADM  360
LDLAVEYIKD LQQEVETLTD KHAKCTCSHK QQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.12e-82bHLH family protein