PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023916957.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

ARR-B

Protein Properties

Length: 681aa MW: 74490.7 Da PI: 6.0158

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023916957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.3	8.2e-29	213	266	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_023916957.1 213 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266 79*****************.******************************8 PP
2	Myb_DNA-binding	42.6	1.4e-13	215	265	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_023916957.1 215 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265 678***********************************************7 PP
3	Response_reg	73	1.2e-24	35	143	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ + +l+++l+ y ev+ + +e al +l+e++ +D+++ D+ mp+mdG++ll++i e +lp+i+++a + ++ + + + G XP_023916957.1 35 VLVVDDDPTCLVILEKMLRTCLY-EVTKCNRAEVALSMLRENKngFDIVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKQVVMKGVTHG 127 89*******************.***********999999******************6654.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l + XP_023916957.1 128 ACDYLIKPVRIEALKN 143 **********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MNQSNCKGSM STASSSTNWK ANDVVPDQFP AGLRVLVVDD DPTCLVILEK MLRTCLYEVT 60 KCNRAEVALS MLRENKNGFD IVISDVHMPD MDGFKLLEHI GLEMDLPVIM MSADDGKQVV 120 MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KKKNEWKDLE QSGSVEEGDR QPKLSEDVDY 180 SSSANEGNWK NSKKRKDEEE ETEDRDDTST LKKPRVVWSV ELHQQFVAAV NQLGIDKAVP 240 KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQGM NNSFMSPQDA TFGAMSSLNG 300 LDLQTLSVTG QLPAQSLATL QAAGLGRSTT KSGIPMPLVD QRNLFSFENP KLRFGEGQQQ 360 QMSSNKPMNL LHGIPTTMEP KQLASLHQSA QSIGGMNMQV NTHGGQGSTL LMQMAQPQSR 420 GQILNESTSS HVPRLPSSIG QPIMTNGIAG GVIGRNGIGD NSRGTGYNQV PPSSSMLSFP 480 MNHTTELAGN SFPLGSTPGI SNVTSKGSFQ EEGNSEMKGS AGFVASYDIF NDLQQQHQHK 540 SHDWELQNVG LHFDASQNAN PIQGNLDVSP SVLVHQGYSS SQRSGQNRNA SAVGRAMFSG 600 VECVEQGNMQ NFSPHLNNLL VDNSVRVKAE TIPDANCQTT LFTEHFGQDD LMSALLKQQG 660 GIGTAETDFD LDGYSMDNIP V

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MNQSNCKGSM STASSSTNWK ANDVVPDQFP AGLRVLVVDD DPTCLVILEK MLRTCLYEVT  60
KCNRAEVALS MLRENKNGFD IVISDVHMPD MDGFKLLEHI GLEMDLPVIM MSADDGKQVV  120
MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KKKNEWKDLE QSGSVEEGDR QPKLSEDVDY  180
SSSANEGNWK NSKKRKDEEE ETEDRDDTST LKKPRVVWSV ELHQQFVAAV NQLGIDKAVP  240
KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQGM NNSFMSPQDA TFGAMSSLNG  300
LDLQTLSVTG QLPAQSLATL QAAGLGRSTT KSGIPMPLVD QRNLFSFENP KLRFGEGQQQ  360
QMSSNKPMNL LHGIPTTMEP KQLASLHQSA QSIGGMNMQV NTHGGQGSTL LMQMAQPQSR  420
GQILNESTSS HVPRLPSSIG QPIMTNGIAG GVIGRNGIGD NSRGTGYNQV PPSSSMLSFP  480
MNHTTELAGN SFPLGSTPGI SNVTSKGSFQ EEGNSEMKGS AGFVASYDIF NDLQQQHQHK  540
SHDWELQNVG LHFDASQNAN PIQGNLDVSP SVLVHQGYSS SQRSGQNRNA SAVGRAMFSG  600
VECVEQGNMQ NFSPHLNNLL VDNSVRVKAE TIPDANCQTT LFTEHFGQDD LMSALLKQQG  660
GIGTAETDFD LDGYSMDNIP V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	0.0	ARR-B family protein