PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023916988.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 130aa    MW: 14274.3 Da    PI: 10.6609
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023916988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.62e-191852135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
  XP_023916988.1 18 CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 52
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MVDLSDKGSE SETHKKTCAD CGTTKTPLWR GGPAGPKSLC NACGIRSRKK RRASLGLNKE  60
DKKSKRASIN GSNNNNHNNK ISNSLKQRLL ALGREVLMQR STVERQRKKL GEEEEAAVLL  120
MALSYGSVYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-33GATA family protein