PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023917000.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 226aa    MW: 25153.1 Da    PI: 5.1356
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023917000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.38.9e-194898155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_023917000.1 48 TVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 98
                    57*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MSMNELQQNS ETESTSNSNP SSPSSPQQQQ NPKKTKRNIH ERDSGKHTVY RGVRMRNWGK  60
WVSEIREPRK KSRIWLGTFP TPEMAARAHD VAALSIKGNS AILNFPELAD SLPRPASLAP  120
RDVQAAAAKA AQMSKFDSLA PSASLSTLVS AMDLSKESEE LSQIVELPSL GTSYESEQDF  180
SKEFVFVDSV DGWGMYSPPW FQTNMENFGA ETNMTLNSFE GLLWEC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-74ERF family protein