PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917139.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 278aa MW: 31655.3 Da PI: 5.6425

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.6	1.6e-19	24	71	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd ll + ++++G g+W+++ar+ g++Rt+k+c++rw++yl XP_023917139.1 24 RGPWTAEEDTLLMNHITLHGEGRWNSVARCAGLKRTGKSCRLRWLNYL 71 89********************************************97 PP
2	Myb_DNA-binding	48.9	1.6e-15	77	120	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T E++l+++++ q+G++ W++Ia++++ gRt++++k++w++ XP_023917139.1 77 RGNITLKEQLLILELHSQWGNR-WSKIAQYLP-GRTDNEIKNYWRT 120 78999***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MDFHVRACGS AKLVVGEEDM DIRRGPWTAE EDTLLMNHIT LHGEGRWNSV ARCAGLKRTG 60 KSCRLRWLNY LRPDVRRGNI TLKEQLLILE LHSQWGNRWS KIAQYLPGRT DNEIKNYWRT 120 RVQKQAKQLK CDVNSKQFRD AMRYVWIPRL MERIRATSES HLDQPTMEYS TTTDCGRVTL 180 DPSQVHASGS DPIDPYFVPA VSGTPSDSSE AQISDLTECY DFSGSNYPNE STNGSGFCPQ 240 GVDIQQAFEH GFGGGDTLDS LWNEENLSFL QQQLCDEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	9e-89	MYB family protein