PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023917164.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 291aa    MW: 33388.7 Da    PI: 9.9964
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023917164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.12.5e-16281071598
                     -EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  15 rlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     +l++p  f+e + g++ ++s  l   + s ++W+v l  +   +  ++++GW+ Fv++n L+ gDf++F++dg+s+f   vk++ 
  XP_023917164.1  28 QLRIPEAFVEYFdGEV-PNSSVLWGPSNSRKTWRVDL--KEVENNLFFQEGWSAFVQDNSLEMGDFLLFRYDGSSNF--SVKIYG 107
                     599******6665545.4553455555677*******..999999***************************99999..666654 PP
2B344.72.4e-14192289199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                     f+  + p +v++ + l +p +f++ +++k e+   +tl++ s + W+++l +y ++ g+    l++GW  F+  n L +gD++vF+l+++ ++ +
  XP_023917164.1 192 FQVSMYPCYVNSDH-LNVPTSFFKIYMEKRER--NVTLRT-SDKLWTMRLvRYANSMGKvyGKLRQGWHAFAIGNALIVGDVCVFELIDKADGLF 282
                     67778888888888.********888877555..577666.88*******555777777444588***********************9988889 PP

                     EEEEE-S CS
              B3  93 vvkvfrk 99 
                     +v++f++
  XP_023917164.1 283 KVSIFKS 289
                     9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MATKPLEPLK RVKKPSFCKV LIGDFPTQLR IPEAFVEYFD GEVPNSSVLW GPSNSRKTWR  60
VDLKEVENNL FFQEGWSAFV QDNSLEMGDF LLFRYDGSSN FSVKIYGRDC CEKGVAGASR  120
KSYTPVYGNG KEEKEKMRNY LKRKSKCMGS IRKERTVIEV IPRHLSCKLP KIQKGARAFE  180
AASKFISNYP SFQVSMYPCY VNSDHLNVPT SFFKIYMEKR ERNVTLRTSD KLWTMRLVRY  240
ANSMGKVYGK LRQGWHAFAI GNALIVGDVC VFELIDKADG LFKVSIFKSS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-19B3 family protein