PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917324.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 205aa MW: 23690.6 Da PI: 8.109

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	9.6e-17	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l++ ++ +G g W++I++ g++R++k+c++rw++yl XP_023917324.1 9 KGLWTEEEDQILLEHIRVHGRGKWNRIPKVTGLKRCGKSCRLRWLNYL 56 678*******************************************97 PP
2	Myb_DNA-binding	58.7	1.3e-18	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++++++lG++ W++Ia +++ gRt++q+k++w+++l XP_023917324.1 62 RGGFSEEEEDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 107 788*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MEAENQYRKG LWTEEEDQIL LEHIRVHGRG KWNRIPKVTG LKRCGKSCRL RWLNYLSPNV 60 KRGGFSEEEE DLIIRLHNLL GNRWSLIAGR VPGRTDNQVK NHWNTHLCKK LGLKKQNRKV 120 VGTSRKHFTQ PEQTNNTLSS NSDAKAMEVS QNENPLLVAD GEASNGEAQW MSNNFAESLP 180 FFQEDSPGLL DFLDDYHFDL AWQSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	2e-66	MYB family protein