PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917505.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 256aa MW: 28311.6 Da PI: 6.8938

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.6	1.2e-12	17	61	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W + Ed +l +av+q+G++ W ++a+++ +R + qc rw+ +l XP_023917505.1 17 GTWLPAEDHRLSEAVAQYGSR-WVLVASKVE-TRNGDQCAKRWNEHL 61 78*****************.*****.**********886 PP
2	Myb_DNA-binding	21.6	5e-07	82	117	8	44
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++e+l+++v+q+G++ Wk Ia+ + + R + +k+++ XP_023917505.1 82 DEERLLNLVEQYGNN-WKPIASSFFESRAPLALKNKY 117 79*********99.***9988888888888888 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MSSQQPHPQH QKPLNSGTWL PAEDHRLSEA VAQYGSRWVL VASKVETRNG DQCAKRWNEH 60 LNPELDRSPW TAEEASVPIS SDEERLLNLV EQYGNNWKPI ASSFFESRAP LALKNKYSLL 120 MRRLKRRGLD QQPLTQRPQQ DVAARHAARP RLSSSVTSPS IAGAVEQLNF YAGSGPVDLS 180 ANDTAGINTN LPTTSLVANN DYIGGVTAIN LGQEALPRTT TAMTIAPPSW DDQHLTWQHF 240 PFLGNGMEFG SVVSTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	2e-18	MYB family protein