PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917507.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 222aa MW: 24669.6 Da PI: 9.1808

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39	1.8e-12	17	61	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W + Ed +l +av+q+G + W ++a+++ +R + qc rw+ +l XP_023917507.1 17 GTWLPAEDHRLSEAVAQYGCR-WVLVASKVE-TRNGDQCAKRWNEHL 61 78***************99.*****.**********886 PP
2	Myb_DNA-binding	21.9	4.1e-07	82	117	8	44
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++e+l+++v+q+G++ Wk Ia+ + + R + +k+++ XP_023917507.1 82 DEERLLNLVEQYGNN-WKPIASSFFESRAPLALKNKY 117 79*********99.***9988888888888888 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MSSQQPHPQN QKPLNSGTWL PAEDHRLSEA VAQYGCRWVL VASKVETRNG DQCAKRWNEH 60 LNPELDRSPW TAEEAIVPIS SDEERLLNLV EQYGNNWKPI ASSFFESRAP LALKNKYSLL 120 MRRLKRRGLD QQPPTQRPQQ DVAARHAARP RLSSSVTSPS IAGAVEQLNF YAGSGPVDLS 180 ANETAGINTN LPTTSLVANN DYIGGVTAIT SDKRRCQGLQ RQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	4e-18	MYB family protein