PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023917568.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 156aa    MW: 16958.9 Da    PI: 4.4401
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023917568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB476.3e-15451102691
           NF-YB  26 kiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 
                       +k++++++ ec +efi++++sea++ ++r+ +kti+ + +  al +lGf +yv +l +    ++
  XP_023917568.1  45 NFAKETRDLLIECCVEFITMLSSEANEIAERDAKKTIACEHITKALDDLGFGEYVPELLKVADSFK 110
                     3578999999*********************************************98876665555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MSDKEFGGND DLSLPKATVQ KIITEVLQQT SAKNATADSS GSGFNFAKET RDLLIECCVE  60
FITMLSSEAN EIAERDAKKT IACEHITKAL DDLGFGEYVP ELLKVADSFK SSQASREKKQ  120
NKVEQSGLSS EELIKAQEAL FRSATEKFNA AEPGDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.42e-26NF-YB family protein