PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917853.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 362aa MW: 40706 Da PI: 8.0067

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.7	5.9e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++ XP_023917853.1 25 FLTKTYQLVDDPATDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHLLCE 110 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ XP_023917853.1 111 IHRRKTA 117 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPATDH IVSWGEDDTT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPQ 120 VAINQHHHHH HPHSPLGVNG PSCPSFFPFS NRVSISPSDS DEQANWCDSP PLVSSPRGGL 180 AGNYNNSVTA LSEDNERLRR SNSMLMSELA HMRKLYNDII YFVQNHVKPV APSNTYPSSL 240 LLCSPQATAT TPIGSNSPMV QKPLNQLFGF CQSNNLKQAF QNNHVMNSPT TTTTSKTSSL 300 TILDEPNSNS CKTKLFGVPL QCSKKRLHPE YGSTNPINME TTKARLVLEK DDLGLNLMPP 360 TC

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPATDH IVSWGEDDTT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPQ  120
VAINQHHHHH HPHSPLGVNG PSCPSFFPFS NRVSISPSDS DEQANWCDSP PLVSSPRGGL  180
AGNYNNSVTA LSEDNERLRR SNSMLMSELA HMRKLYNDII YFVQNHVKPV APSNTYPSSL  240
LLCSPQATAT TPIGSNSPMV QKPLNQLFGF CQSNNLKQAF QNNHVMNSPT TTTTSKTSSL  300
TILDEPNSNS CKTKLFGVPL QCSKKRLHPE YGSTNPINME TTKARLVLEK DDLGLNLMPP  360
TC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-111	HSF family protein