PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023917922.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Dof
Protein Properties Length: 315aa    MW: 34816.1 Da    PI: 9.134
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023917922.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.72.6e-383797262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +++ +kcprC+s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+++
  XP_023917922.1 37 PQQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAK 97
                    78999***************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MQPEIRDGEG SEDMKPQSQD QRLKPMQLEN QQQQQQPQQP QKCPRCESLN TKFCYYNNYS  60
LSQPRYFCKT CRRYWTQGGT LRNVPVGGGC RKGKRAKTSS SSSSGENSRS QQPQQQNLTN  120
PPAVIPSNPV ITRSPALRTK EHGNLASPSA PSIPSISPYY AAGGYLSSLA AIQSLNQSQT  180
YSQALGVGDD LGGSSNLSLL QGFSAPSFGS QQQQRQIQQT QFYQMGNRDR NMEHLYPTEE  240
TLIQSNRPIS SSSQHDWHHS FINNTNNQTA SDSALWTMST ATTTTTTGNT NNNNNTGPTL  300
NPSQWPDLPG YGPRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.14e-32Dof family protein