PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023917969.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 96aa    MW: 11264.5 Da    PI: 6.807
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023917969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.19.8e-09752245
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      +WT+   +++ +a  +++++   +W+  ar +g g+t ++++ ++ 
   XP_023917969.1  7 SNWTAKQNKRFENALVMYPKDtpdRWHNLARAVG-GKTVEEVIKHYE 52
                     58********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MASGGSSNWT AKQNKRFENA LVMYPKDTPD RWHNLARAVG GKTVEEVIKH YEELVEDLRQ  60
IETGHVPLPN YRDTEENSKG YNYMDEEQRL RNLRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.25e-37MYB_related family protein